CDS

Accession Number TCMCG006C93470
gbkey CDS
Protein Id XP_013676677.1
Location join(42257802..42257986,42258082..42258185,42258265..42258511,42258591..42258648,42258737..42258826,42258984..42259049,42259225..42259314,42259414..42259572,42259673..42259794,42259915..42259987,42260069..42260140)
Gene LOC106381320
GeneID 106381320
Organism Brassica napus

Protein

Length 421aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013821223.2
Definition COP9 signalosome complex subunit 3-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category OT
Description motif in proteasome subunits, Int-6, Nip-1 and TRIP-15
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K12177        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000338        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010389        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010971        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045787        [VIEW IN EMBL-EBI]
GO:0045931        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070646        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090068        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1901989        [VIEW IN EMBL-EBI]
GO:1901990        [VIEW IN EMBL-EBI]
GO:1901992        [VIEW IN EMBL-EBI]
GO:1902749        [VIEW IN EMBL-EBI]
GO:1902751        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCACGGTGGAGGCTGTGATAACGTCAATCCAGGGTCTATCAGCGAGCTCCAGTGATCTATATGCACTTCACGATCTTTTGAAAGGAGCTGTGGACTCGCTCCGAACCGACTCGGAGCTTCAGCTTTCTACTCTTGACCAGCTCGATCCCTCGAAGCATTCTCTCGGCTACCTCTATCTCCTCGACGTTCTTACGTATGGTCCAGTGTCGAAGGAGAAAGTCTTGTTAATTGCTCGGTTCATCAACGCTTGTGATGCTGTGCAGATTCGTTTAGCGAGCGAGAAATTTGTTTCTCTTTGTAAGAGATTCAAAGACAAAGTTTTGGAGCTCAGAGATCCTTTACTAGGTGTGGCGCCACTGTTGGCAGCTGTTCGTAAGGTTCAGGTCTCTACCAAACGTTTGACTGCGTTGCATCCGGATTGTCTTCAGCTGTGTCTGCTGGCTAAGTGCTATAAAGCTGGTTTCTCCATTCTTAGTGATGATATCTTGGAGGTTGACCAGCCAAGGGAATTTTATCTCTATTGCTATTATGGGGGAATGATATGCATTGGGTTGAAGAGATTCCAGAAAGCATTGGAGCTTCTTTACAATGTTGTCACTGCTCCAATGCATATTGTCAATGCCATAGCTCTTGAGGCGTACAAAAAGTACATACTGGTGACTCTCATTCACTCTGGACAGTTTAGCATCAGTCTCCCCAAGTGCGCTTCTACAACAGCTAAGAGTAGCTTCAAAACCTGGTGTACACCTTACATTGAGGTGGGTATGCGTTACAACGACGGGAAAATCAGTGAACTAGAGGCAGTGCTTGTGGCCAACAGCTCAGATTTTGAAAAGGACAATAACCTTGGATTAGTTAAGCAAGCAGTTGCATCTCTTTACAAGCGGAACATTCTGAGATTGACTCAGAAGTACTTGACCTTGTCGCTTCAAGATATAGCCAACATGGTCCAGCTTGCCAATGCTAAGGAGGCGGAAATGCGTGTGCTCCAGATGATCCAGGATGGTCAGATACATGCCCTTATCAACCAGAAAGATGGAATGGTCAGATTCTTGGAGGACCCTGAGCAGTACAAAACCAGTGAGATGATAGAGATAATGGATTCTGTCATTCAAAGGACAATCGGGCTGTCTAAGAATCTCATAGCCATGGATGAGAGCTTGTCATGTGATCCTTTATACTTGGGAAAGGTTGGAAGGGAAAGGCAAAGGTATGACTTTGGAGAAGATTTTGACACTGTCCCTCAGAAGTTCTCAATGTAA
Protein:  
MSTVEAVITSIQGLSASSSDLYALHDLLKGAVDSLRTDSELQLSTLDQLDPSKHSLGYLYLLDVLTYGPVSKEKVLLIARFINACDAVQIRLASEKFVSLCKRFKDKVLELRDPLLGVAPLLAAVRKVQVSTKRLTALHPDCLQLCLLAKCYKAGFSILSDDILEVDQPREFYLYCYYGGMICIGLKRFQKALELLYNVVTAPMHIVNAIALEAYKKYILVTLIHSGQFSISLPKCASTTAKSSFKTWCTPYIEVGMRYNDGKISELEAVLVANSSDFEKDNNLGLVKQAVASLYKRNILRLTQKYLTLSLQDIANMVQLANAKEAEMRVLQMIQDGQIHALINQKDGMVRFLEDPEQYKTSEMIEIMDSVIQRTIGLSKNLIAMDESLSCDPLYLGKVGRERQRYDFGEDFDTVPQKFSM